bill mentioned this on the HT side..
David Weaver
..about how it would be done with hand tools, so I did a piece (this wasn't a great idea as this is a turning block that's sat under my metal vise for ages, and it was full of metal).
micronized pigment stain followed with a quick rub of shellac and linseed oil as a lubricant. The liquid is just minwax stain (the micronized pigment overpowers it, it just becomes a carrier or stain base).
This is done without sanding or scraping and the virtue of the shellac rub done on this is first, I would finish it with shellac, and second, the oil in the stain serves to make shellac application easy and then you have a dry surface in a hurry and can continue rubbing if you want. 
In case it looks like the wood isn't really changed in color on the end grain, notice on the side that it's half sap and half heart - the coloring on the end grain takes care of hiding that.
Dents are there as I didn't handplane all of them out (they wouldn't be there if I handplaned to the mark.
Total time handplaning the side and top was only a couple of minutes (because it included stopping and resharpening thanks to metal resident in the wood).
sometimes, I think we believe that this stuff is only made doable because of modern purchaseable stuff, but this is how I would do a larger project next time. The last one I did, I planed and scraped and then sanded thinking it would make the color better for the micronized pigment stain.
Here's two test pieces, one is sanded and one is planed with no sanding following hand planing. Can you tell which is which? If you did this with minwax can stain, they would be drastically different.
https://i.imgur.com/psUXnUJ.jpg?1 (The wood is cherry, also) The stain on the cherry piece above should be this color but the artist color has dried into a cake in the can so that's the end of that.
https://i.imgur.com/319ewry.jpg?1
( I do believe the first one was sanded as I vaguely recall that the two lines in the middle of it are due to not fully sanding out a scraper mark or something).